Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 LSM12P1-201ENST00000411836 588 ntBASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
RAB3IPQ96QF0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 KRT18P11-201ENST00000435214 1283 ntBASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 CNN2P6-201ENST00000439038 900 ntBASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB3IPQ96QF0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 RCC2P3-201ENST00000418112 1537 ntBASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 AL121832.2-201ENST00000610979 668 ntBASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB3IPQ96QF0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 AC016769.1-201ENST00000409132 1010 ntBASIC17.46■□□□□ 0.39
RAB3IPQ96QF0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms