Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX27Q96L92 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX27Q96L92 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX27Q96L92 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX27Q96L92 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SNX27Q96L92 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX27Q96L92 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNX27Q96L92 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SNX27Q96L92 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX27Q96L92 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX27Q96L92 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX27Q96L92 AL590627.1-203ENST00000421194 1026 ntBASIC19.27■□□□□ 0.68
SNX27Q96L92 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX27Q96L92 AP002469.2-201ENST00000531724 424 ntBASIC19.27■□□□□ 0.68
SNX27Q96L92 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SNX27Q96L92 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 TP73-AS1-207ENST00000624167 988 ntBASIC19.27■□□□□ 0.68
SNX27Q96L92 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX27Q96L92 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX27Q96L92 AP000997.3-201ENST00000623333 2250 ntBASIC19.27■□□□□ 0.68
SNX27Q96L92 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SNX27Q96L92 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX27Q96L92 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX27Q96L92 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
SNX27Q96L92 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SNX27Q96L92 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX27Q96L92 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX27Q96L92 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX27Q96L92 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX27Q96L92 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX27Q96L92 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SNX27Q96L92 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX27Q96L92 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SNX27Q96L92 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX27Q96L92 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 BICD1-207ENST00000551848 1962 ntBASIC19.26■□□□□ 0.67
SNX27Q96L92 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SNX27Q96L92 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX27Q96L92 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SNX27Q96L92 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SNX27Q96L92 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX27Q96L92 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX27Q96L92 RBM17P3-201ENST00000417687 1192 ntBASIC19.25■□□□□ 0.67
SNX27Q96L92 BX842568.4-201ENST00000421222 227 ntBASIC19.25■□□□□ 0.67
SNX27Q96L92 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX27Q96L92 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX27Q96L92 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX27Q96L92 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.25■□□□□ 0.67
SNX27Q96L92 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms