Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PKNOX2Q96KN3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 AC007322.4-201ENST00000509611 723 ntBASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PKNOX2Q96KN3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.39■□□□□ 0.7
PKNOX2Q96KN3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
PKNOX2Q96KN3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.39■□□□□ 0.7
PKNOX2Q96KN3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PKNOX2Q96KN3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PKNOX2Q96KN3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 AL603756.1-201ENST00000606511 2163 ntBASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PKNOX2Q96KN3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PKNOX2Q96KN3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKNOX2Q96KN3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.37■□□□□ 0.69
PKNOX2Q96KN3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PKNOX2Q96KN3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms