Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAX2Q96IS3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAX2Q96IS3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.98□□□□□ -0.17
RAX2Q96IS3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 LTB4R2-202ENST00000528054 3092 ntBASIC13.97□□□□□ -0.17
RAX2Q96IS3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 TSPY12P-201ENST00000421279 868 ntBASIC13.97□□□□□ -0.17
RAX2Q96IS3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 AC091607.1-201ENST00000490318 1060 ntBASIC13.97□□□□□ -0.17
RAX2Q96IS3 KRT18P31-201ENST00000506277 1292 ntBASIC13.97□□□□□ -0.17
RAX2Q96IS3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.97□□□□□ -0.17
RAX2Q96IS3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.97□□□□□ -0.17
RAX2Q96IS3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAX2Q96IS3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 NSUN5P1-202ENST00000421140 1535 ntBASIC13.96□□□□□ -0.17
RAX2Q96IS3 NSUN5P2-203ENST00000457352 1529 ntBASIC13.96□□□□□ -0.17
RAX2Q96IS3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 AC004870.1-201ENST00000315132 882 ntBASIC13.96□□□□□ -0.17
RAX2Q96IS3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 IGHV3-47-201ENST00000425060 335 ntBASIC13.96□□□□□ -0.17
RAX2Q96IS3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 AP005901.3-202ENST00000581653 237 ntBASIC13.96□□□□□ -0.17
RAX2Q96IS3 LINC01711-201ENST00000598340 967 ntBASIC13.96□□□□□ -0.17
RAX2Q96IS3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAX2Q96IS3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.96□□□□□ -0.17
RAX2Q96IS3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAX2Q96IS3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RAX2Q96IS3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAX2Q96IS3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.95□□□□□ -0.18
RAX2Q96IS3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAX2Q96IS3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.95□□□□□ -0.18
RAX2Q96IS3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.95□□□□□ -0.18
RAX2Q96IS3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAX2Q96IS3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAX2Q96IS3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAX2Q96IS3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RAX2Q96IS3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAX2Q96IS3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms