Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
IFT43Q96FT9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT43Q96FT9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 AL645929.1-201ENST00000420084 975 ntBASIC18.46■□□□□ 0.55
IFT43Q96FT9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
IFT43Q96FT9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT43Q96FT9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 AC008687.5-201ENST00000593746 558 ntBASIC18.45■□□□□ 0.54
IFT43Q96FT9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.45■□□□□ 0.54
IFT43Q96FT9 AL024508.2-201ENST00000607749 1894 ntBASIC18.45■□□□□ 0.54
IFT43Q96FT9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 LINC01126-201ENST00000623515 1646 ntBASIC18.45■□□□□ 0.54
IFT43Q96FT9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IFT43Q96FT9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
IFT43Q96FT9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFT43Q96FT9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.44■□□□□ 0.54
IFT43Q96FT9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms