Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AC122714.2-201ENST00000502787 707 ntBASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.05■□□□□ 0.16
SNRNP40Q96DI7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 SIGLEC16-201ENST00000599858 1437 ntBASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 AC096633.1-201ENST00000422446 749 ntBASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 AC132938.6-201ENST00000623828 1655 ntBASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 AC010460.3-201ENST00000511359 1579 ntBASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.04■□□□□ 0.16
SNRNP40Q96DI7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 HCG11-201ENST00000411553 5696 ntBASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 SPDYE21P-201ENST00000413323 827 ntBASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 YBX1P5-201ENST00000509441 847 ntBASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 MIR4469-201ENST00000583919 79 ntBASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNRNP40Q96DI7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 AC002310.6-201ENST00000624451 1377 ntBASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.02■□□□□ 0.16
SNRNP40Q96DI7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms