Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 TSPY12P-201ENST00000421279 868 ntBASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RHBDF1Q96CC6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 AL353692.3-201ENST00000407031 1396 ntBASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 KRT8P47-201ENST00000604727 1398 ntBASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 SPDYE13P-201ENST00000445314 798 ntBASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 DUX4L26-201ENST00000489078 1255 ntBASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 AC022616.7-201ENST00000525383 220 ntBASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 GPR32P1-201ENST00000601788 811 ntBASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RHBDF1Q96CC6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 AC009949.1-201ENST00000623048 1830 ntBASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 AC116407.2-201ENST00000613639 860 ntBASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 AC083849.1-201ENST00000615227 514 ntBASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 AL355312.1-201ENST00000407115 2176 ntBASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RHBDF1Q96CC6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 AC139713.2-201ENST00000641328 2723 ntBASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.42■□□□□ 0.38
RHBDF1Q96CC6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms