Protein–RNA interactions for Protein: Q8TAF3

WDR48, WD repeat-containing protein 48, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48Q8TAF3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 AC079781.3-201ENST00000449110 356 ntBASIC17.7■□□□□ 0.42
WDR48Q8TAF3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
WDR48Q8TAF3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 NSUN5P1-202ENST00000421140 1535 ntBASIC17.69■□□□□ 0.42
WDR48Q8TAF3 NSUN5P2-203ENST00000457352 1529 ntBASIC17.69■□□□□ 0.42
WDR48Q8TAF3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 AC099343.3-201ENST00000605834 2503 ntBASIC17.69■□□□□ 0.42
WDR48Q8TAF3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
WDR48Q8TAF3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.68■□□□□ 0.42
WDR48Q8TAF3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 AL022342.1-201ENST00000400363 863 ntBASIC17.68■□□□□ 0.42
WDR48Q8TAF3 MINOS1P3-201ENST00000457048 203 ntBASIC17.68■□□□□ 0.42
WDR48Q8TAF3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.68■□□□□ 0.42
WDR48Q8TAF3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms