Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AL133373.2-201ENST00000623187 2828 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MIR574-201ENST00000385209 96 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC012615.1-201ENST00000565797 1299 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 BX640515.1-201ENST00000617215 977 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC148477.8-201ENST00000624298 468 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CD63-204ENST00000546939 779 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 FAM215A-202ENST00000632077 792 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC116562.4-201ENST00000641316 2276 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CDV3-207ENST00000508481 661 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NAA38-203ENST00000575071 553 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MYB-201ENST00000316528 3571 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MYB-241ENST00000616088 3573 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC074051.2-201ENST00000565115 352 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC026471.1-201ENST00000564629 3026 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 AC005332.8-201ENST00000622750 2735 ntBASIC5.54□□□□□ -1.52
SYNE1Q8NF91 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNE1Q8NF91 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 TSPY12P-201ENST00000421279 868 ntBASIC5.53□□□□□ -1.52
SYNE1Q8NF91 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 AL049840.3-201ENST00000602669 611 ntBASIC5.53□□□□□ -1.52
SYNE1Q8NF91 TP73-AS1-207ENST00000624167 988 ntBASIC5.53□□□□□ -1.52
SYNE1Q8NF91 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 IL9RP2-201ENST00000423948 1312 ntBASIC5.53□□□□□ -1.52
SYNE1Q8NF91 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNE1Q8NF91 TSPY26P-202ENST00000565928 3884 ntBASIC5.53□□□□□ -1.52
SYNE1Q8NF91 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms