Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 HOXB1-202ENST00000577092 1414 ntBASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 SDHAP2-201ENST00000455183 2001 ntBASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 KRT18P23-201ENST00000435622 1283 ntBASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 AL023803.3-201ENST00000615559 522 ntBASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 AC092865.7-201ENST00000641832 219 ntBASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 AC092338.2-201ENST00000568827 1415 ntBASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PNLDC1Q8NA58 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 AC007663.1-201ENST00000438948 1240 ntBASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PNLDC1Q8NA58 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
PNLDC1Q8NA58 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms