Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NOC2LP1-202ENST00000452600 2235 ntBASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAM1L1Q8N609 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAM1L1Q8N609 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 AC096582.2-201ENST00000510860 516 ntBASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 AC011467.2-201ENST00000598425 242 ntBASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 TP73-AS1-210ENST00000637775 1455 ntBASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAM1L1Q8N609 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC009949.1-201ENST00000623048 1830 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC007967.3-201ENST00000434308 558 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 FOSL1P1-201ENST00000511041 816 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC138894.3-201ENST00000603787 634 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AL121772.3-201ENST00000610840 674 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC114341.1-201ENST00000618070 349 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC012313.10-201ENST00000623509 926 ntBASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 AC010460.3-201ENST00000511359 1579 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms