Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB42Q8N4Z0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 AC016734.2-201ENST00000624325 1377 ntBASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 MTCL1P1-201ENST00000446207 792 ntBASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB42Q8N4Z0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 AC068472.1-201ENST00000474589 881 ntBASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 AC112698.1-201ENST00000510299 916 ntBASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 AC093458.2-201ENST00000623150 629 ntBASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB42Q8N4Z0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 AC246785.2-201ENST00000432512 513 ntBASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 Z69720.1-201ENST00000601483 472 ntBASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB42Q8N4Z0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms