Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 NSUN5P1-202ENST00000421140 1535 ntBASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 NSUN5P2-203ENST00000457352 1529 ntBASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 TPM4P1-201ENST00000436100 807 ntBASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 KRT18P65-201ENST00000439811 1286 ntBASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 AC091304.2-201ENST00000564639 760 ntBASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM48Q8IWZ4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM48Q8IWZ4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 NUS1P2-201ENST00000417358 873 ntBASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 MTCL1P1-201ENST00000446207 792 ntBASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM48Q8IWZ4 AC068472.1-201ENST00000474589 881 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms