Protein–RNA interactions for Protein: Q7L099

RUFY3, Protein RUFY3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3Q7L099 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RUFY3Q7L099 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.19■□□□□ 0.98
RUFY3Q7L099 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RUFY3Q7L099 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 AC133963.1-201ENST00000504166 1679 ntBASIC21.18■□□□□ 0.98
RUFY3Q7L099 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 TSPY12P-201ENST00000421279 868 ntBASIC21.18■□□□□ 0.98
RUFY3Q7L099 AC063952.2-201ENST00000498792 1227 ntBASIC21.18■□□□□ 0.98
RUFY3Q7L099 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 VENTXP5-201ENST00000523979 775 ntBASIC21.18■□□□□ 0.98
RUFY3Q7L099 AC116407.2-201ENST00000613639 860 ntBASIC21.18■□□□□ 0.98
RUFY3Q7L099 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.18■□□□□ 0.98
RUFY3Q7L099 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RUFY3Q7L099 LINC00304-203ENST00000565008 1864 ntBASIC21.18■□□□□ 0.98
RUFY3Q7L099 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 RCN1P1-201ENST00000400413 996 ntBASIC21.17■□□□□ 0.98
RUFY3Q7L099 SPDYE13P-201ENST00000445314 798 ntBASIC21.17■□□□□ 0.98
RUFY3Q7L099 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 AL353692.3-201ENST00000407031 1396 ntBASIC21.17■□□□□ 0.98
RUFY3Q7L099 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 REXO1L11P-201ENST00000620964 1927 ntBASIC21.17■□□□□ 0.98
RUFY3Q7L099 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RUFY3Q7L099 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RUFY3Q7L099 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 AC080080.1-201ENST00000625121 2420 ntBASIC21.16■□□□□ 0.98
RUFY3Q7L099 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 SIRPAP1-201ENST00000448467 1770 ntBASIC21.16■□□□□ 0.98
RUFY3Q7L099 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 LINC01311-201ENST00000565162 1445 ntBASIC21.16■□□□□ 0.98
RUFY3Q7L099 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RUFY3Q7L099 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.16■□□□□ 0.98
RUFY3Q7L099 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms