Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 ATP5G2P1-201ENST00000433580 426 ntBASIC16.8■□□□□ 0.28
RTL4Q6ZR62 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 HCG4P8-203ENST00000443049 980 ntBASIC16.8■□□□□ 0.28
RTL4Q6ZR62 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 RNF126P1-202ENST00000569893 925 ntBASIC16.8■□□□□ 0.28
RTL4Q6ZR62 AC005332.3-201ENST00000589904 676 ntBASIC16.8■□□□□ 0.28
RTL4Q6ZR62 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 GPR32P1-201ENST00000601788 811 ntBASIC16.8■□□□□ 0.28
RTL4Q6ZR62 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 Z83836.1-201ENST00000624605 1642 ntBASIC16.8■□□□□ 0.28
RTL4Q6ZR62 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTL4Q6ZR62 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AC135776.1-201ENST00000319817 2481 ntBASIC16.79■□□□□ 0.28
RTL4Q6ZR62 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AC016734.2-201ENST00000624325 1377 ntBASIC16.79■□□□□ 0.28
RTL4Q6ZR62 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AC068880.1-201ENST00000507289 2297 ntBASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 AL390719.2-201ENST00000606993 987 ntBASIC16.79■□□□□ 0.28
RTL4Q6ZR62 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RTL4Q6ZR62 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 IGHGP-201ENST00000390555 1178 ntBASIC16.78■□□□□ 0.28
RTL4Q6ZR62 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 CHCHD2P8-201ENST00000429873 447 ntBASIC16.78■□□□□ 0.28
RTL4Q6ZR62 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.78■□□□□ 0.28
RTL4Q6ZR62 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms