Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 BX276092.7-203ENST00000637198 1536 ntBASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC141Q6ZP82 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
CCDC141Q6ZP82 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 LBH-203ENST00000404397 543 ntTSL 4 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 CFL1-202ENST00000524553 860 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 POLD4-207ENST00000531239 584 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 AL353135.1-201ENST00000606729 504 ntBASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
CCDC141Q6ZP82 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 MRPL20P1-201ENST00000400819 433 ntBASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 HTR5BP-201ENST00000430851 1154 ntBASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 AC004790.2-201ENST00000623588 572 ntBASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 HARS-201ENST00000307633 1780 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 AC009949.1-201ENST00000623048 1830 ntBASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 POR-209ENST00000439269 1858 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCDC141Q6ZP82 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 AL596442.2-201ENST00000610240 980 ntBASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 RFPL4AP1-201ENST00000530883 850 ntBASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 OR7E47P-204ENST00000575924 449 ntBASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 AC027612.4-201ENST00000605371 583 ntBASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 ELL2P1-201ENST00000413990 1906 ntBASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCDC141Q6ZP82 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 AP002414.1-201ENST00000391405 1147 ntBASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 AC002558.1-201ENST00000488906 803 ntBASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 STK19B-204ENST00000512515 211 ntBASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCDC141Q6ZP82 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC141Q6ZP82 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms