Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 ABCD1P5-201ENST00000445663 754 ntBASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 AC106795.1-205ENST00000512851 1056 ntBASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 SLC25A6P4-201ENST00000586535 553 ntBASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 AL355877.3-201ENST00000622820 899 ntBASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 AP005117.1-201ENST00000584346 1413 ntBASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.9■□□□□ 0.78
SWSAP1Q6NVH7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.89■□□□□ 0.78
SWSAP1Q6NVH7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 FAM197Y8-203ENST00000450145 560 ntBASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SWSAP1Q6NVH7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 AL020996.1-203ENST00000536896 2307 ntBASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 RBM17P3-201ENST00000417687 1192 ntBASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 FGFR3P6-201ENST00000457012 610 ntBASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
SWSAP1Q6NVH7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.87■□□□□ 0.77
SWSAP1Q6NVH7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms