Protein–RNA interactions for Protein: Q12907

LMAN2, Vesicular integral-membrane protein VIP36, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMAN2Q12907 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMAN2Q12907 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LMAN2Q12907 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.21■□□□□ 0.51
LMAN2Q12907 AL031284.1-201ENST00000419297 478 ntBASIC18.21■□□□□ 0.51
LMAN2Q12907 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 KRT18P67-201ENST00000432816 1264 ntBASIC18.21■□□□□ 0.51
LMAN2Q12907 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.21■□□□□ 0.51
LMAN2Q12907 RNPS1P1-201ENST00000507437 918 ntBASIC18.21■□□□□ 0.51
LMAN2Q12907 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LMAN2Q12907 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.21■□□□□ 0.51
LMAN2Q12907 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 AC008608.2-201ENST00000606089 416 ntBASIC18.21■□□□□ 0.51
LMAN2Q12907 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LMAN2Q12907 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.21■□□□□ 0.51
LMAN2Q12907 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LMAN2Q12907 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LMAN2Q12907 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.21■□□□□ 0.51
LMAN2Q12907 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.21■□□□□ 0.51
LMAN2Q12907 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LMAN2Q12907 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.21■□□□□ 0.5
LMAN2Q12907 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LMAN2Q12907 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LMAN2Q12907 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LMAN2Q12907 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.2■□□□□ 0.5
LMAN2Q12907 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 FAM220CP-201ENST00000395253 831 ntBASIC18.2■□□□□ 0.5
LMAN2Q12907 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.2■□□□□ 0.5
LMAN2Q12907 RNA5SP419-201ENST00000515908 135 ntBASIC18.2■□□□□ 0.5
LMAN2Q12907 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LMAN2Q12907 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 AP000997.3-201ENST00000623333 2250 ntBASIC18.2■□□□□ 0.5
LMAN2Q12907 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.2■□□□□ 0.5
LMAN2Q12907 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LMAN2Q12907 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
LMAN2Q12907 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 AL355877.3-201ENST00000622820 899 ntBASIC18.19■□□□□ 0.5
LMAN2Q12907 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
LMAN2Q12907 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LMAN2Q12907 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LMAN2Q12907 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.18■□□□□ 0.5
LMAN2Q12907 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMAN2Q12907 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LMAN2Q12907 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.18■□□□□ 0.5
LMAN2Q12907 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMAN2Q12907 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMAN2Q12907 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LMAN2Q12907 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LMAN2Q12907 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms