Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL20P78556 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CCL20P78556 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL20P78556 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.11□□□□□ -0.15
CCL20P78556 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.11□□□□□ -0.15
CCL20P78556 Z85996.1-201ENST00000494644 937 ntBASIC14.11□□□□□ -0.15
CCL20P78556 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 KRT8P50-201ENST00000562022 1438 ntBASIC14.11□□□□□ -0.15
CCL20P78556 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL20P78556 HLA-J-201ENST00000462773 1622 ntBASIC14.11□□□□□ -0.15
CCL20P78556 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL20P78556 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL20P78556 PAUPAR-201ENST00000630360 2965 ntBASIC14.1□□□□□ -0.15
CCL20P78556 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL20P78556 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.1□□□□□ -0.15
CCL20P78556 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 AL139246.5-201ENST00000606645 996 ntBASIC14.1□□□□□ -0.15
CCL20P78556 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL20P78556 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL20P78556 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
CCL20P78556 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL20P78556 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL20P78556 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL20P78556 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms