Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.69□□□□□ -0.38
RPL39P62891 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.69□□□□□ -0.38
RPL39P62891 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
RPL39P62891 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RPL39P62891 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.69□□□□□ -0.38
RPL39P62891 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 FAM207BP-201ENST00000447172 505 ntBASIC12.69□□□□□ -0.38
RPL39P62891 AP002982.1-201ENST00000492365 877 ntBASIC12.69□□□□□ -0.38
RPL39P62891 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.69□□□□□ -0.38
RPL39P62891 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.69□□□□□ -0.38
RPL39P62891 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
RPL39P62891 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.69□□□□□ -0.38
RPL39P62891 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RPL39P62891 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 AC133963.1-201ENST00000504166 1679 ntBASIC12.69□□□□□ -0.38
RPL39P62891 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.69□□□□□ -0.38
RPL39P62891 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RPL39P62891 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.69□□□□□ -0.38
RPL39P62891 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.69□□□□□ -0.38
RPL39P62891 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.69□□□□□ -0.38
RPL39P62891 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RPL39P62891 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.68□□□□□ -0.38
RPL39P62891 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
RPL39P62891 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.68□□□□□ -0.38
RPL39P62891 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 LINC01126-201ENST00000623515 1646 ntBASIC12.68□□□□□ -0.38
RPL39P62891 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RPL39P62891 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.68□□□□□ -0.38
RPL39P62891 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.68□□□□□ -0.38
RPL39P62891 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RPL39P62891 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 AC100803.2-201ENST00000562459 1963 ntBASIC12.67□□□□□ -0.38
RPL39P62891 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RPL39P62891 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
RPL39P62891 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RPL39P62891 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RPL39P62891 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.67□□□□□ -0.38
RPL39P62891 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.67□□□□□ -0.38
RPL39P62891 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.67□□□□□ -0.38
RPL39P62891 KSR1P1-201ENST00000446298 240 ntBASIC12.67□□□□□ -0.38
RPL39P62891 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.67□□□□□ -0.38
RPL39P62891 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
RPL39P62891 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.67□□□□□ -0.38
RPL39P62891 AP003097.1-201ENST00000530657 1135 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms