Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 MIR4787-201ENST00000607364 84 ntBASIC13.5□□□□□ -0.25
HIST1H2BCP62807 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 AC138035.3-201ENST00000622706 2791 ntBASIC13.5□□□□□ -0.25
HIST1H2BCP62807 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 AL357033.4-201ENST00000617703 1807 ntBASIC13.5□□□□□ -0.25
HIST1H2BCP62807 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BCP62807 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 KRT8P8-201ENST00000434750 1448 ntBASIC13.49□□□□□ -0.25
HIST1H2BCP62807 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 RNF216P1-203ENST00000404404 2427 ntBASIC13.49□□□□□ -0.25
HIST1H2BCP62807 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 AC004987.1-201ENST00000428627 508 ntBASIC13.49□□□□□ -0.25
HIST1H2BCP62807 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2BCP62807 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 SNX18-202ENST00000343017 3140 ntBASIC13.48□□□□□ -0.25
HIST1H2BCP62807 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 AP002414.2-201ENST00000591780 3365 ntBASIC13.48□□□□□ -0.25
HIST1H2BCP62807 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2BCP62807 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms