Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UBE2D3P61077 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.78□□□□□ -0.36
UBE2D3P61077 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.78□□□□□ -0.36
UBE2D3P61077 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.78□□□□□ -0.36
UBE2D3P61077 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 KRT17P2-201ENST00000300992 1314 ntBASIC12.78□□□□□ -0.36
UBE2D3P61077 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.78□□□□□ -0.36
UBE2D3P61077 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.78□□□□□ -0.36
UBE2D3P61077 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UBE2D3P61077 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.77□□□□□ -0.36
UBE2D3P61077 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.77□□□□□ -0.36
UBE2D3P61077 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
UBE2D3P61077 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
UBE2D3P61077 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
UBE2D3P61077 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
UBE2D3P61077 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
UBE2D3P61077 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
UBE2D3P61077 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.77□□□□□ -0.36
UBE2D3P61077 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.77□□□□□ -0.36
UBE2D3P61077 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
UBE2D3P61077 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 TSPY14P-201ENST00000303979 915 ntBASIC12.77□□□□□ -0.37
UBE2D3P61077 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D3P61077 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D3P61077 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D3P61077 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.77□□□□□ -0.37
UBE2D3P61077 EGLN1P1-201ENST00000531623 762 ntBASIC12.77□□□□□ -0.37
UBE2D3P61077 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D3P61077 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 AP006294.2-201ENST00000641667 209 ntBASIC12.77□□□□□ -0.37
UBE2D3P61077 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.77□□□□□ -0.37
UBE2D3P61077 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 NFIC-211ENST00000641145 8399 ntBASIC12.77□□□□□ -0.37
UBE2D3P61077 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
UBE2D3P61077 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
UBE2D3P61077 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.77□□□□□ -0.37
UBE2D3P61077 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
UBE2D3P61077 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D3P61077 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D3P61077 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
UBE2D3P61077 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D3P61077 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
UBE2D3P61077 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
UBE2D3P61077 AL024508.2-201ENST00000607749 1894 ntBASIC12.76□□□□□ -0.37
UBE2D3P61077 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBE2D3P61077 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms