Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN20P56880 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN20P56880 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN20P56880 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN20P56880 AC093458.2-201ENST00000623150 629 ntBASIC16.43■□□□□ 0.22
CLDN20P56880 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 AC134043.2-201ENST00000624206 2238 ntBASIC16.43■□□□□ 0.22
CLDN20P56880 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLDN20P56880 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN20P56880 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN20P56880 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN20P56880 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 LINC01126-201ENST00000623515 1646 ntBASIC16.42■□□□□ 0.22
CLDN20P56880 Z83836.1-201ENST00000624605 1642 ntBASIC16.42■□□□□ 0.22
CLDN20P56880 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN20P56880 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN20P56880 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN20P56880 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.42■□□□□ 0.22
CLDN20P56880 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN20P56880 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN20P56880 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN20P56880 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN20P56880 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN20P56880 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN20P56880 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN20P56880 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CLDN20P56880 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 AC005332.3-201ENST00000589904 676 ntBASIC16.41■□□□□ 0.22
CLDN20P56880 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN20P56880 AC012317.2-201ENST00000623305 2251 ntBASIC16.41■□□□□ 0.22
CLDN20P56880 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN20P56880 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN20P56880 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLDN20P56880 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN20P56880 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms