Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ECEL1P3-201ENST00000427961 737 ntBASIC17.54■□□□□ 0.4
CDH13P55290 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH13P55290 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH13P55290 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH13P55290 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CDH13P55290 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CDH13P55290 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH13P55290 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH13P55290 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH13P55290 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH13P55290 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDH13P55290 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CDH13P55290 AL596275.1-201ENST00000423464 877 ntBASIC17.53■□□□□ 0.4
CDH13P55290 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CDH13P55290 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH13P55290 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDH13P55290 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 PCDHA12-202ENST00000613593 2588 ntBASIC17.53■□□□□ 0.4
CDH13P55290 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH13P55290 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH13P55290 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH13P55290 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH13P55290 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH13P55290 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 PVRIG2P-201ENST00000435460 978 ntBASIC17.52■□□□□ 0.4
CDH13P55290 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.52■□□□□ 0.4
CDH13P55290 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH13P55290 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH13P55290 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH13P55290 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDH13P55290 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH13P55290 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH13P55290 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH13P55290 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH13P55290 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CDH13P55290 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms