Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PMS1P54277 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.7■□□□□ 0.74
PMS1P54277 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PMS1P54277 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 HBZP1-201ENST00000354915 429 ntBASIC19.7■□□□□ 0.74
PMS1P54277 TSPY5P-201ENST00000426936 936 ntBASIC19.7■□□□□ 0.74
PMS1P54277 AC104076.2-201ENST00000448912 469 ntBASIC19.7■□□□□ 0.74
PMS1P54277 AL359075.1-203ENST00000462729 1002 ntBASIC19.7■□□□□ 0.74
PMS1P54277 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.7■□□□□ 0.74
PMS1P54277 VENTXP5-201ENST00000523979 775 ntBASIC19.7■□□□□ 0.74
PMS1P54277 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.7■□□□□ 0.74
PMS1P54277 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PMS1P54277 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PMS1P54277 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PMS1P54277 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PMS1P54277 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS1P54277 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PMS1P54277 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.69■□□□□ 0.74
PMS1P54277 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 KRT18P48-201ENST00000434763 852 ntBASIC19.69■□□□□ 0.74
PMS1P54277 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.69■□□□□ 0.74
PMS1P54277 SPDYE13P-201ENST00000445314 798 ntBASIC19.69■□□□□ 0.74
PMS1P54277 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.69■□□□□ 0.74
PMS1P54277 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.69■□□□□ 0.74
PMS1P54277 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS1P54277 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.69■□□□□ 0.74
PMS1P54277 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
PMS1P54277 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.69■□□□□ 0.74
PMS1P54277 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PMS1P54277 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.69■□□□□ 0.74
PMS1P54277 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PMS1P54277 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
PMS1P54277 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 MIR662-201ENST00000384847 95 ntBASIC19.68■□□□□ 0.74
PMS1P54277 IGHGP-201ENST00000390555 1178 ntBASIC19.68■□□□□ 0.74
PMS1P54277 RNF152P1-201ENST00000397754 604 ntBASIC19.68■□□□□ 0.74
PMS1P54277 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PMS1P54277 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.68■□□□□ 0.74
PMS1P54277 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.68■□□□□ 0.74
PMS1P54277 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.68■□□□□ 0.74
PMS1P54277 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.68■□□□□ 0.74
PMS1P54277 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.68■□□□□ 0.74
PMS1P54277 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PMS1P54277 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PMS1P54277 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PMS1P54277 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS1P54277 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS1P54277 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS1P54277 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PMS1P54277 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.67■□□□□ 0.74
PMS1P54277 AC112907.2-201ENST00000448639 330 ntBASIC19.67■□□□□ 0.74
PMS1P54277 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.67■□□□□ 0.74
PMS1P54277 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.67■□□□□ 0.74
PMS1P54277 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PMS1P54277 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PMS1P54277 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms