Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.96■□□□□ 0.31
KNTC1P50748 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KNTC1P50748 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.96■□□□□ 0.31
KNTC1P50748 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.96■□□□□ 0.31
KNTC1P50748 AC011467.4-201ENST00000594891 528 ntBASIC16.96■□□□□ 0.31
KNTC1P50748 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.96■□□□□ 0.31
KNTC1P50748 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.96■□□□□ 0.31
KNTC1P50748 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
KNTC1P50748 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.96■□□□□ 0.31
KNTC1P50748 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KNTC1P50748 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.96■□□□□ 0.31
KNTC1P50748 BX005266.1-201ENST00000473402 457 ntBASIC16.96■□□□□ 0.3
KNTC1P50748 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.96■□□□□ 0.3
KNTC1P50748 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.96■□□□□ 0.3
KNTC1P50748 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 ELL2P1-201ENST00000413990 1906 ntBASIC16.95■□□□□ 0.3
KNTC1P50748 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 ESPNP-201ENST00000270691 2015 ntBASIC16.95■□□□□ 0.3
KNTC1P50748 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KNTC1P50748 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
KNTC1P50748 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KNTC1P50748 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.95■□□□□ 0.3
KNTC1P50748 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.95■□□□□ 0.3
KNTC1P50748 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.95■□□□□ 0.3
KNTC1P50748 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 MIR4469-201ENST00000583919 79 ntBASIC16.95■□□□□ 0.3
KNTC1P50748 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.95■□□□□ 0.3
KNTC1P50748 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KNTC1P50748 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.94■□□□□ 0.3
KNTC1P50748 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.94■□□□□ 0.3
KNTC1P50748 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.94■□□□□ 0.3
KNTC1P50748 AC027612.4-201ENST00000605371 583 ntBASIC16.94■□□□□ 0.3
KNTC1P50748 AL513190.1-201ENST00000621254 727 ntBASIC16.94■□□□□ 0.3
KNTC1P50748 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.94■□□□□ 0.3
KNTC1P50748 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KNTC1P50748 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
KNTC1P50748 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.94■□□□□ 0.3
KNTC1P50748 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
KNTC1P50748 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.94■□□□□ 0.3
KNTC1P50748 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.94■□□□□ 0.3
KNTC1P50748 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.94■□□□□ 0.3
KNTC1P50748 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.94■□□□□ 0.3
KNTC1P50748 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.94■□□□□ 0.3
KNTC1P50748 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KNTC1P50748 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 KRT8P47-201ENST00000604727 1398 ntBASIC16.93■□□□□ 0.3
KNTC1P50748 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KNTC1P50748 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.93■□□□□ 0.3
KNTC1P50748 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KNTC1P50748 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms