Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK7P50613 AC122714.2-201ENST00000502787 707 ntBASIC19.74■□□□□ 0.75
CDK7P50613 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK7P50613 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK7P50613 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK7P50613 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.74■□□□□ 0.75
CDK7P50613 AC004817.3-201ENST00000602957 2129 ntBASIC19.74■□□□□ 0.75
CDK7P50613 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK7P50613 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CDK7P50613 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.74■□□□□ 0.75
CDK7P50613 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDK7P50613 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK7P50613 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDK7P50613 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.74■□□□□ 0.75
CDK7P50613 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.74■□□□□ 0.75
CDK7P50613 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDK7P50613 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.73■□□□□ 0.75
CDK7P50613 AC136632.2-201ENST00000512891 861 ntBASIC19.73■□□□□ 0.75
CDK7P50613 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDK7P50613 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CDK7P50613 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 AL596442.2-201ENST00000610240 980 ntBASIC19.73■□□□□ 0.75
CDK7P50613 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDK7P50613 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDK7P50613 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDK7P50613 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK7P50613 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDK7P50613 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDK7P50613 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK7P50613 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
CDK7P50613 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK7P50613 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK7P50613 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK7P50613 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK7P50613 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.72■□□□□ 0.75
CDK7P50613 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CDK7P50613 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK7P50613 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 TNXA-203ENST00000507684 2038 ntBASIC19.71■□□□□ 0.75
CDK7P50613 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK7P50613 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDK7P50613 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDK7P50613 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDK7P50613 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDK7P50613 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.71■□□□□ 0.75
CDK7P50613 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK7P50613 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK7P50613 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDK7P50613 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK7P50613 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK7P50613 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK7P50613 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK7P50613 AC010460.3-201ENST00000511359 1579 ntBASIC19.7■□□□□ 0.74
CDK7P50613 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms