Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A3P43003 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC1A3P43003 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SLC1A3P43003 AC113404.2-201ENST00000507884 177 ntBASIC16.49■□□□□ 0.23
SLC1A3P43003 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC1A3P43003 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC1A3P43003 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A3P43003 AC024563.2-201ENST00000603282 481 ntBASIC16.49■□□□□ 0.23
SLC1A3P43003 AC006011.2-201ENST00000621313 1158 ntBASIC16.49■□□□□ 0.23
SLC1A3P43003 AC079602.3-201ENST00000623931 403 ntBASIC16.49■□□□□ 0.23
SLC1A3P43003 OR6D1P-202ENST00000641007 5290 ntBASIC16.49■□□□□ 0.23
SLC1A3P43003 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A3P43003 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SLC1A3P43003 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A3P43003 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A3P43003 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A3P43003 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A3P43003 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A3P43003 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC1A3P43003 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC1A3P43003 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A3P43003 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A3P43003 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC1A3P43003 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A3P43003 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
SLC1A3P43003 HLA-F-220ENST00000434407 884 ntBASIC16.48■□□□□ 0.23
SLC1A3P43003 FAM210CP-201ENST00000445714 574 ntBASIC16.48■□□□□ 0.23
SLC1A3P43003 KRT18P21-201ENST00000515767 1272 ntBASIC16.48■□□□□ 0.23
SLC1A3P43003 DUTP2-201ENST00000519164 463 ntBASIC16.48■□□□□ 0.23
SLC1A3P43003 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.48■□□□□ 0.23
SLC1A3P43003 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A3P43003 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A3P43003 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A3P43003 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A3P43003 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A3P43003 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SLC1A3P43003 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A3P43003 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A3P43003 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC1A3P43003 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC1A3P43003 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A3P43003 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A3P43003 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A3P43003 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A3P43003 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A3P43003 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A3P43003 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 AC132938.6-201ENST00000623828 1655 ntBASIC16.46■□□□□ 0.23
SLC1A3P43003 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A3P43003 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A3P43003 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A3P43003 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms