Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.99■□□□□ 0.47
LSP1P33241 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 AC073111.5-205ENST00000641717 521 ntBASIC17.99■□□□□ 0.47
LSP1P33241 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LSP1P33241 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.99■□□□□ 0.47
LSP1P33241 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LSP1P33241 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LSP1P33241 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 AC068418.2-201ENST00000577309 3703 ntBASIC17.98■□□□□ 0.47
LSP1P33241 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 MIR564-202ENST00000385049 94 ntBASIC17.98■□□□□ 0.47
LSP1P33241 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.98■□□□□ 0.47
LSP1P33241 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.98■□□□□ 0.47
LSP1P33241 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSP1P33241 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LSP1P33241 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.97■□□□□ 0.47
LSP1P33241 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 AC009102.3-201ENST00000623118 1491 ntBASIC17.97■□□□□ 0.47
LSP1P33241 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.97■□□□□ 0.47
LSP1P33241 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.97■□□□□ 0.47
LSP1P33241 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.97■□□□□ 0.47
LSP1P33241 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.97■□□□□ 0.47
LSP1P33241 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 AC006970.2-201ENST00000450065 779 ntBASIC17.97■□□□□ 0.47
LSP1P33241 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.97■□□□□ 0.47
LSP1P33241 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LSP1P33241 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSP1P33241 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.97■□□□□ 0.47
LSP1P33241 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.97■□□□□ 0.47
LSP1P33241 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
LSP1P33241 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LSP1P33241 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.96■□□□□ 0.47
LSP1P33241 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LSP1P33241 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LSP1P33241 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.96■□□□□ 0.47
LSP1P33241 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.96■□□□□ 0.47
LSP1P33241 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.96■□□□□ 0.47
LSP1P33241 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
LSP1P33241 AC133552.2-202ENST00000575694 574 ntBASIC17.96■□□□□ 0.47
LSP1P33241 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms