Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PTPN1P18031 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN1P18031 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PTPN1P18031 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPN1P18031 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN1P18031 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPN1P18031 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN1P18031 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN1P18031 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN1P18031 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN1P18031 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
PTPN1P18031 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN1P18031 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN1P18031 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN1P18031 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN1P18031 AC096633.1-201ENST00000422446 749 ntBASIC18.94■□□□□ 0.62
PTPN1P18031 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 LINC01711-201ENST00000598340 967 ntBASIC18.94■□□□□ 0.62
PTPN1P18031 AC011467.2-201ENST00000598425 242 ntBASIC18.94■□□□□ 0.62
PTPN1P18031 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.94■□□□□ 0.62
PTPN1P18031 AL591684.3-201ENST00000605187 298 ntBASIC18.94■□□□□ 0.62
PTPN1P18031 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN1P18031 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN1P18031 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN1P18031 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN1P18031 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN1P18031 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN1P18031 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN1P18031 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN1P18031 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN1P18031 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN1P18031 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN1P18031 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN1P18031 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN1P18031 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN1P18031 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN1P18031 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PTPN1P18031 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 AC007967.3-201ENST00000434308 558 ntBASIC18.92■□□□□ 0.62
PTPN1P18031 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN1P18031 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.92■□□□□ 0.62
PTPN1P18031 RN7SL510P-201ENST00000581311 263 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms