Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMC3P17980 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PSMC3P17980 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.67■□□□□ 0.58
PSMC3P17980 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.67■□□□□ 0.58
PSMC3P17980 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMC3P17980 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.67■□□□□ 0.58
PSMC3P17980 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMC3P17980 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMC3P17980 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.67■□□□□ 0.58
PSMC3P17980 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.67■□□□□ 0.58
PSMC3P17980 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMC3P17980 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PSMC3P17980 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.66■□□□□ 0.58
PSMC3P17980 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PSMC3P17980 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.66■□□□□ 0.58
PSMC3P17980 HNRNPDP1-201ENST00000439535 754 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 POLD2P1-201ENST00000511220 997 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.66■□□□□ 0.58
PSMC3P17980 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.66■□□□□ 0.58
PSMC3P17980 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMC3P17980 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.66■□□□□ 0.58
PSMC3P17980 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMC3P17980 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.66■□□□□ 0.58
PSMC3P17980 AC011467.2-201ENST00000598425 242 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 TERC-201ENST00000602385 541 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMC3P17980 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMC3P17980 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 PMS2P7-201ENST00000506558 1336 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PSMC3P17980 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 ZNF259P1-201ENST00000407656 1365 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMC3P17980 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
PSMC3P17980 AC125634.1-201ENST00000438758 1403 ntBASIC18.66■□□□□ 0.58
PSMC3P17980 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMC3P17980 LINC00602-201ENST00000629776 2065 ntBASIC18.65■□□□□ 0.58
PSMC3P17980 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PSMC3P17980 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PSMC3P17980 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMC3P17980 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMC3P17980 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PSMC3P17980 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PSMC3P17980 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMC3P17980 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMC3P17980 AC092865.5-201ENST00000545435 363 ntBASIC18.65■□□□□ 0.58
PSMC3P17980 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMC3P17980 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMC3P17980 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PSMC3P17980 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PSMC3P17980 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMC3P17980 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms