Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC139713.2-201ENST00000641328 2723 ntBASIC15.92■□□□□ 0.14
ERCC1P07992 KRT8P7-201ENST00000533003 1432 ntBASIC15.92■□□□□ 0.14
ERCC1P07992 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ERCC1P07992 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.92■□□□□ 0.14
ERCC1P07992 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ERCC1P07992 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
ERCC1P07992 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ERCC1P07992 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC1P07992 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 UPK3BP1-201ENST00000428678 509 ntBASIC15.91■□□□□ 0.14
ERCC1P07992 VENTXP5-201ENST00000523979 775 ntBASIC15.91■□□□□ 0.14
ERCC1P07992 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.91■□□□□ 0.14
ERCC1P07992 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.91■□□□□ 0.14
ERCC1P07992 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 AC112497.1-201ENST00000624824 639 ntBASIC15.91■□□□□ 0.14
ERCC1P07992 AL358472.4-201ENST00000633140 710 ntBASIC15.91■□□□□ 0.14
ERCC1P07992 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.91■□□□□ 0.14
ERCC1P07992 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
ERCC1P07992 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ERCC1P07992 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ERCC1P07992 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ERCC1P07992 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ERCC1P07992 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ERCC1P07992 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.9■□□□□ 0.14
ERCC1P07992 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.9■□□□□ 0.14
ERCC1P07992 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC1P07992 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 AC112907.2-201ENST00000448639 330 ntBASIC15.9■□□□□ 0.14
ERCC1P07992 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.9■□□□□ 0.14
ERCC1P07992 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.9■□□□□ 0.14
ERCC1P07992 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.9■□□□□ 0.14
ERCC1P07992 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.9■□□□□ 0.14
ERCC1P07992 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
ERCC1P07992 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ERCC1P07992 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC1P07992 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ERCC1P07992 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.9■□□□□ 0.14
ERCC1P07992 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ERCC1P07992 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.89■□□□□ 0.13
ERCC1P07992 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 IER3-202ENST00000376377 1350 ntBASIC15.89■□□□□ 0.13
ERCC1P07992 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ERCC1P07992 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ERCC1P07992 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms