Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.66■□□□□ 0.42
CAPN1P07384 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN1P07384 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CAPN1P07384 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 LINC00896-202ENST00000609602 2128 ntBASIC17.66■□□□□ 0.42
CAPN1P07384 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CAPN1P07384 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN1P07384 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CAPN1P07384 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CAPN1P07384 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN1P07384 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN1P07384 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 AC093010.1-201ENST00000473625 1624 ntBASIC17.65■□□□□ 0.42
CAPN1P07384 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CAPN1P07384 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN1P07384 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.65■□□□□ 0.42
CAPN1P07384 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 AC009065.1-201ENST00000564055 1225 ntBASIC17.65■□□□□ 0.42
CAPN1P07384 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
CAPN1P07384 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CAPN1P07384 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN1P07384 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN1P07384 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN1P07384 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN1P07384 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.64■□□□□ 0.42
CAPN1P07384 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CAPN1P07384 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN1P07384 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CAPN1P07384 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN1P07384 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN1P07384 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN1P07384 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN1P07384 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN1P07384 AC034232.1-201ENST00000506026 1064 ntBASIC17.64■□□□□ 0.41
CAPN1P07384 KRT18P56-201ENST00000507275 550 ntBASIC17.64■□□□□ 0.41
CAPN1P07384 MIR3180-4-201ENST00000582223 153 ntBASIC17.64■□□□□ 0.41
CAPN1P07384 AC093458.2-201ENST00000623150 629 ntBASIC17.64■□□□□ 0.41
CAPN1P07384 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN1P07384 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN1P07384 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN1P07384 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CAPN1P07384 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms