Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.4■■□□□ 1.02
POLR3DP05423 AL031008.1-201ENST00000619963 541 ntBASIC21.4■■□□□ 1.02
POLR3DP05423 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
POLR3DP05423 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
POLR3DP05423 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
POLR3DP05423 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
POLR3DP05423 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
POLR3DP05423 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
POLR3DP05423 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.39■■□□□ 1.02
POLR3DP05423 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
POLR3DP05423 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.39■■□□□ 1.02
POLR3DP05423 PHGDH-209ENST00000641074 1780 ntBASIC21.39■■□□□ 1.01
POLR3DP05423 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.39■■□□□ 1.01
POLR3DP05423 AC079781.3-201ENST00000449110 356 ntBASIC21.39■■□□□ 1.01
POLR3DP05423 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.39■■□□□ 1.01
POLR3DP05423 AC112698.1-201ENST00000510299 916 ntBASIC21.39■■□□□ 1.01
POLR3DP05423 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.39■■□□□ 1.01
POLR3DP05423 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.39■■□□□ 1.01
POLR3DP05423 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.39■■□□□ 1.01
POLR3DP05423 AC132938.6-201ENST00000623828 1655 ntBASIC21.39■■□□□ 1.01
POLR3DP05423 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
POLR3DP05423 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR3DP05423 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
POLR3DP05423 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 AL133373.2-201ENST00000623187 2828 ntBASIC21.38■■□□□ 1.01
POLR3DP05423 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
POLR3DP05423 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3DP05423 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR3DP05423 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
POLR3DP05423 RCN1P2-201ENST00000398357 915 ntBASIC21.38■■□□□ 1.01
POLR3DP05423 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3DP05423 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR3DP05423 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.38■■□□□ 1.01
POLR3DP05423 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR3DP05423 AC114341.1-201ENST00000618070 349 ntBASIC21.38■■□□□ 1.01
POLR3DP05423 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 TP73-AS1-210ENST00000637775 1455 ntBASIC21.38■■□□□ 1.01
POLR3DP05423 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
POLR3DP05423 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR3DP05423 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.37■■□□□ 1.01
POLR3DP05423 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.37■■□□□ 1.01
POLR3DP05423 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.37■■□□□ 1.01
POLR3DP05423 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
POLR3DP05423 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.37■■□□□ 1.01
POLR3DP05423 AC009533.2-201ENST00000543664 586 ntBASIC21.37■■□□□ 1.01
POLR3DP05423 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
POLR3DP05423 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 KRT8P10-201ENST00000450021 1447 ntBASIC21.37■■□□□ 1.01
POLR3DP05423 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR3DP05423 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR3DP05423 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
POLR3DP05423 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR3DP05423 AKR1C7P-201ENST00000305623 895 ntBASIC21.36■■□□□ 1.01
POLR3DP05423 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.36■■□□□ 1.01
POLR3DP05423 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.36■■□□□ 1.01
POLR3DP05423 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR3DP05423 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR3DP05423 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR3DP05423 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
POLR3DP05423 AC104692.2-201ENST00000603054 253 ntBASIC21.36■■□□□ 1.01
POLR3DP05423 AL138831.2-201ENST00000606564 490 ntBASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms