Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CAPNS1P04632 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPNS1P04632 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPNS1P04632 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 FAM197Y8-203ENST00000450145 560 ntBASIC17.82■□□□□ 0.44
CAPNS1P04632 AC009065.1-201ENST00000564055 1225 ntBASIC17.82■□□□□ 0.44
CAPNS1P04632 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPNS1P04632 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 AL691403.2-201ENST00000618460 490 ntBASIC17.82■□□□□ 0.44
CAPNS1P04632 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.82■□□□□ 0.44
CAPNS1P04632 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CAPNS1P04632 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPNS1P04632 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPNS1P04632 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPNS1P04632 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 LINC00167-201ENST00000530583 1419 ntBASIC17.81■□□□□ 0.44
CAPNS1P04632 AL645608.8-201ENST00000606034 2086 ntBASIC17.81■□□□□ 0.44
CAPNS1P04632 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 MIR564-202ENST00000385049 94 ntBASIC17.81■□□□□ 0.44
CAPNS1P04632 PGAM5P1-201ENST00000518923 814 ntBASIC17.81■□□□□ 0.44
CAPNS1P04632 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.81■□□□□ 0.44
CAPNS1P04632 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.81■□□□□ 0.44
CAPNS1P04632 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.81■□□□□ 0.44
CAPNS1P04632 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 AC148477.8-201ENST00000624298 468 ntBASIC17.81■□□□□ 0.44
CAPNS1P04632 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPNS1P04632 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CAPNS1P04632 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPNS1P04632 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPNS1P04632 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CAPNS1P04632 AC124067.4-201ENST00000519691 2379 ntBASIC17.8■□□□□ 0.44
CAPNS1P04632 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CAPNS1P04632 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 KRT18P67-201ENST00000432816 1264 ntBASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.8■□□□□ 0.44
CAPNS1P04632 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPNS1P04632 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CAPNS1P04632 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPNS1P04632 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPNS1P04632 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.8■□□□□ 0.44
CAPNS1P04632 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms