Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.35■□□□□ 0.21
P04436 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
P04436 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
P04436 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.35■□□□□ 0.21
P04436 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
P04436 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
P04436 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04436 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
P04436 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
P04436 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.35■□□□□ 0.21
P04436 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.34■□□□□ 0.21
P04436 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
P04436 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
P04436 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.34■□□□□ 0.21
P04436 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
P04436 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.34■□□□□ 0.21
P04436 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.34■□□□□ 0.21
P04436 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.34■□□□□ 0.21
P04436 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
P04436 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
P04436 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.34■□□□□ 0.21
P04436 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.34■□□□□ 0.21
P04436 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.34■□□□□ 0.21
P04436 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.34■□□□□ 0.21
P04436 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.34■□□□□ 0.21
P04436 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
P04436 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04436 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04436 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
P04436 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 AC026396.1-201ENST00000419388 421 ntBASIC16.33■□□□□ 0.2
P04436 SAPCD2P3-201ENST00000455031 850 ntBASIC16.33■□□□□ 0.2
P04436 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
P04436 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.33■□□□□ 0.2
P04436 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.33■□□□□ 0.2
P04436 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.33■□□□□ 0.2
P04436 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
P04436 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.33■□□□□ 0.2
P04436 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.33■□□□□ 0.2
P04436 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.33■□□□□ 0.2
P04436 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.33■□□□□ 0.2
P04436 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
P04436 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.33■□□□□ 0.2
P04436 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04436 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.33■□□□□ 0.2
P04436 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P04436 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04436 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04436 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04436 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms