Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 OR7E47P-204ENST00000575924 449 ntBASIC20.31■□□□□ 0.84
ALDH1A1P00352 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ALDH1A1P00352 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.31■□□□□ 0.84
ALDH1A1P00352 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 TERF1P3-201ENST00000505638 1227 ntBASIC20.3■□□□□ 0.84
ALDH1A1P00352 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 AC005225.4-201ENST00000557330 545 ntBASIC20.3■□□□□ 0.84
ALDH1A1P00352 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ALDH1A1P00352 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
ALDH1A1P00352 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.29■□□□□ 0.84
ALDH1A1P00352 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.29■□□□□ 0.84
ALDH1A1P00352 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALDH1A1P00352 SIRPAP1-201ENST00000448467 1770 ntBASIC20.29■□□□□ 0.84
ALDH1A1P00352 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALDH1A1P00352 BASP1P1-201ENST00000430708 665 ntBASIC20.28■□□□□ 0.84
ALDH1A1P00352 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 AC112191.1-201ENST00000523689 701 ntBASIC20.28■□□□□ 0.84
ALDH1A1P00352 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 AL390955.2-201ENST00000603032 514 ntBASIC20.28■□□□□ 0.84
ALDH1A1P00352 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 AC009093.7-201ENST00000623853 1223 ntBASIC20.28■□□□□ 0.84
ALDH1A1P00352 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALDH1A1P00352 GMCL1P1-201ENST00000463439 1581 ntBASIC20.28■□□□□ 0.84
ALDH1A1P00352 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALDH1A1P00352 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALDH1A1P00352 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
ALDH1A1P00352 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.27■□□□□ 0.84
ALDH1A1P00352 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 CXCL1P1-201ENST00000502804 216 ntBASIC20.27■□□□□ 0.84
ALDH1A1P00352 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALDH1A1P00352 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
ALDH1A1P00352 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms