Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 MRPL3P1-201ENST00000400109 1033 ntBASIC17.87■□□□□ 0.45
PCDH8O95206 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 FAM197Y8-203ENST00000450145 560 ntBASIC17.87■□□□□ 0.45
PCDH8O95206 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 SLC25A6P4-201ENST00000586535 553 ntBASIC17.87■□□□□ 0.45
PCDH8O95206 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH8O95206 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH8O95206 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDH8O95206 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 AC004408.2-201ENST00000623613 2777 ntBASIC17.86■□□□□ 0.45
PCDH8O95206 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH8O95206 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDH8O95206 AL096828.2-201ENST00000567259 1965 ntBASIC17.86■□□□□ 0.45
PCDH8O95206 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
PCDH8O95206 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH8O95206 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 MTDHP3-201ENST00000594186 672 ntBASIC17.86■□□□□ 0.45
PCDH8O95206 AC064862.7-201ENST00000604520 867 ntBASIC17.86■□□□□ 0.45
PCDH8O95206 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDH8O95206 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDH8O95206 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PCDH8O95206 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH8O95206 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDH8O95206 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDH8O95206 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH8O95206 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDH8O95206 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDH8O95206 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDH8O95206 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDH8O95206 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDH8O95206 TP73-AS1-207ENST00000624167 988 ntBASIC17.85■□□□□ 0.45
PCDH8O95206 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDH8O95206 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms