Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SSSCA1O60232 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 AL023284.2-201ENST00000405850 579 ntBASIC14.64□□□□□ -0.07
SSSCA1O60232 NCF1B-203ENST00000435988 1254 ntBASIC14.64□□□□□ -0.07
SSSCA1O60232 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.64□□□□□ -0.07
SSSCA1O60232 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 AC008622.2-201ENST00000617006 1229 ntBASIC14.64□□□□□ -0.07
SSSCA1O60232 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 AL163051.1-201ENST00000569214 1512 ntBASIC14.64□□□□□ -0.07
SSSCA1O60232 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SSSCA1O60232 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.64□□□□□ -0.07
SSSCA1O60232 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SSSCA1O60232 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SSSCA1O60232 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSSCA1O60232 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SSSCA1O60232 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSSCA1O60232 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SSSCA1O60232 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.63□□□□□ -0.07
SSSCA1O60232 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SSSCA1O60232 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.63□□□□□ -0.07
SSSCA1O60232 AC069544.1-201ENST00000609399 999 ntBASIC14.63□□□□□ -0.07
SSSCA1O60232 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.63□□□□□ -0.07
SSSCA1O60232 AL023875.1-201ENST00000640777 796 ntBASIC14.63□□□□□ -0.07
SSSCA1O60232 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.63□□□□□ -0.07
SSSCA1O60232 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.63□□□□□ -0.07
SSSCA1O60232 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
SSSCA1O60232 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SSSCA1O60232 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SSSCA1O60232 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SSSCA1O60232 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.62□□□□□ -0.07
SSSCA1O60232 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SSSCA1O60232 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 GPAT2P1-201ENST00000444924 1672 ntBASIC14.62□□□□□ -0.07
SSSCA1O60232 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.62□□□□□ -0.07
SSSCA1O60232 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.62□□□□□ -0.07
SSSCA1O60232 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.62□□□□□ -0.07
SSSCA1O60232 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.62□□□□□ -0.07
SSSCA1O60232 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.62□□□□□ -0.07
SSSCA1O60232 FAM207BP-201ENST00000447172 505 ntBASIC14.62□□□□□ -0.07
SSSCA1O60232 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.62□□□□□ -0.07
SSSCA1O60232 UNC93B5-201ENST00000530315 699 ntBASIC14.62□□□□□ -0.07
SSSCA1O60232 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
SSSCA1O60232 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SSSCA1O60232 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.62□□□□□ -0.07
SSSCA1O60232 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SSSCA1O60232 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.62□□□□□ -0.07
SSSCA1O60232 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSSCA1O60232 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.62□□□□□ -0.07
SSSCA1O60232 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSSCA1O60232 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSSCA1O60232 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.61□□□□□ -0.07
SSSCA1O60232 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms