Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.79■□□□□ 0.28
AP3D1O14617 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
AP3D1O14617 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3D1O14617 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3D1O14617 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.78■□□□□ 0.28
AP3D1O14617 SEC1P-202ENST00000473944 940 ntBASIC16.78■□□□□ 0.28
AP3D1O14617 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.78■□□□□ 0.28
AP3D1O14617 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP3D1O14617 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3D1O14617 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AP3D1O14617 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3D1O14617 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
AP3D1O14617 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP3D1O14617 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP3D1O14617 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP3D1O14617 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 ECEL1P3-201ENST00000427961 737 ntBASIC16.77■□□□□ 0.28
AP3D1O14617 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.77■□□□□ 0.28
AP3D1O14617 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3D1O14617 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3D1O14617 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.77■□□□□ 0.28
AP3D1O14617 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3D1O14617 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3D1O14617 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3D1O14617 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 AC010240.3-201ENST00000607688 395 ntBASIC16.77■□□□□ 0.28
AP3D1O14617 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
AP3D1O14617 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3D1O14617 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3D1O14617 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.77■□□□□ 0.27
AP3D1O14617 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.77■□□□□ 0.27
AP3D1O14617 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3D1O14617 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
AP3D1O14617 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
AP3D1O14617 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3D1O14617 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.77■□□□□ 0.27
AP3D1O14617 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3D1O14617 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.77■□□□□ 0.27
AP3D1O14617 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
AP3D1O14617 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.77■□□□□ 0.27
AP3D1O14617 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3D1O14617 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3D1O14617 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3D1O14617 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3D1O14617 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3D1O14617 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms