Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
LST1O00453 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.66□□□□□ -0.54
LST1O00453 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
LST1O00453 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.66□□□□□ -0.54
LST1O00453 PAUPAR-201ENST00000630360 2965 ntBASIC11.66□□□□□ -0.54
LST1O00453 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.66□□□□□ -0.54
LST1O00453 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LST1O00453 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LST1O00453 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LST1O00453 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LST1O00453 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.65□□□□□ -0.54
LST1O00453 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC11.65□□□□□ -0.54
LST1O00453 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 PBX1-209ENST00000485769 834 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LST1O00453 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LST1O00453 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LST1O00453 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LST1O00453 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.65□□□□□ -0.55
LST1O00453 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
LST1O00453 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
LST1O00453 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.64□□□□□ -0.55
LST1O00453 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC11.64□□□□□ -0.55
LST1O00453 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 YBX1P10-201ENST00000444752 975 ntBASIC11.64□□□□□ -0.55
LST1O00453 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.64□□□□□ -0.55
LST1O00453 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 GCK-205ENST00000437084 1385 ntTSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LST1O00453 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LST1O00453 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LST1O00453 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms