Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC28A1O00337 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC28A1O00337 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A1O00337 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC28A1O00337 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A1O00337 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC28A1O00337 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC28A1O00337 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A1O00337 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.27■□□□□ 0.36
SLC28A1O00337 AC141257.4-201ENST00000634557 245 ntBASIC17.27■□□□□ 0.36
SLC28A1O00337 AC136944.6-201ENST00000634818 245 ntBASIC17.27■□□□□ 0.36
SLC28A1O00337 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A1O00337 AL023806.1-201ENST00000603994 1649 ntBASIC17.27■□□□□ 0.36
SLC28A1O00337 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC28A1O00337 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC28A1O00337 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A1O00337 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.27■□□□□ 0.35
SLC28A1O00337 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC28A1O00337 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A1O00337 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A1O00337 AL138688.1-201ENST00000624851 1594 ntBASIC17.27■□□□□ 0.35
SLC28A1O00337 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A1O00337 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC28A1O00337 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC28A1O00337 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC28A1O00337 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC28A1O00337 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC28A1O00337 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC28A1O00337 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 AC141586.5-201ENST00000624546 2050 ntBASIC17.26■□□□□ 0.35
SLC28A1O00337 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC28A1O00337 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC28A1O00337 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC28A1O00337 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC28A1O00337 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SLC28A1O00337 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC28A1O00337 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC28A1O00337 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC28A1O00337 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC28A1O00337 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC28A1O00337 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 AC024563.2-201ENST00000603282 481 ntBASIC17.25■□□□□ 0.35
SLC28A1O00337 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC28A1O00337 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC28A1O00337 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC28A1O00337 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC28A1O00337 FZD10-202ENST00000539839 3282 ntBASIC17.25■□□□□ 0.35
SLC28A1O00337 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC28A1O00337 KRT89P-201ENST00000620027 1478 ntBASIC17.24■□□□□ 0.35
SLC28A1O00337 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SLC28A1O00337 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC28A1O00337 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC28A1O00337 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms