Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK1AO00322 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 KRT18P55-202ENST00000578578 1546 ntBASIC17.01■□□□□ 0.31
UPK1AO00322 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1AO00322 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UPK1AO00322 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17■□□□□ 0.31
UPK1AO00322 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17■□□□□ 0.31
UPK1AO00322 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
UPK1AO00322 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
UPK1AO00322 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
UPK1AO00322 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17■□□□□ 0.31
UPK1AO00322 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17■□□□□ 0.31
UPK1AO00322 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UPK1AO00322 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1AO00322 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1AO00322 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UPK1AO00322 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.99■□□□□ 0.31
UPK1AO00322 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.99■□□□□ 0.31
UPK1AO00322 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK1AO00322 AC079602.3-201ENST00000623931 403 ntBASIC16.99■□□□□ 0.31
UPK1AO00322 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UPK1AO00322 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.99■□□□□ 0.31
UPK1AO00322 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
UPK1AO00322 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
UPK1AO00322 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1AO00322 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
UPK1AO00322 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.98■□□□□ 0.31
UPK1AO00322 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.98■□□□□ 0.31
UPK1AO00322 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 STARP1-201ENST00000397973 869 ntBASIC16.98■□□□□ 0.31
UPK1AO00322 SPDYE15P-201ENST00000424157 909 ntBASIC16.98■□□□□ 0.31
UPK1AO00322 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.98■□□□□ 0.31
UPK1AO00322 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.98■□□□□ 0.31
UPK1AO00322 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.98■□□□□ 0.31
UPK1AO00322 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.98■□□□□ 0.31
UPK1AO00322 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
UPK1AO00322 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 AC006011.2-201ENST00000621313 1158 ntBASIC16.98■□□□□ 0.31
UPK1AO00322 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPK1AO00322 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.97■□□□□ 0.31
UPK1AO00322 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms