Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YJEFN3A6XGL0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YJEFN3A6XGL0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
YJEFN3A6XGL0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YJEFN3A6XGL0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YJEFN3A6XGL0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TSPY19P-201ENST00000418461 509 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 AC096633.1-201ENST00000422446 749 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TSPY18P-201ENST00000441642 509 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 AL732292.2-201ENST00000609649 430 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 AC097374.2-201ENST00000618617 1306 ntBASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.66■□□□□ 0.58
YJEFN3A6XGL0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 RCN1P2-201ENST00000398357 915 ntBASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 NUS1P2-201ENST00000417358 873 ntBASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 AC007967.3-201ENST00000434308 558 ntBASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 AC018470.1-201ENST00000624790 3129 ntBASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YJEFN3A6XGL0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YJEFN3A6XGL0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YJEFN3A6XGL0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YJEFN3A6XGL0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
YJEFN3A6XGL0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YJEFN3A6XGL0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
YJEFN3A6XGL0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 POM121L3P-201ENST00000419331 1163 ntBASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 AC009533.2-201ENST00000543664 586 ntBASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms