Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TSPY14P-201ENST00000303979 915 ntBASIC19.04■□□□□ 0.64
RCCD1A6NED2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 AC010653.2-201ENST00000623505 997 ntBASIC19.04■□□□□ 0.64
RCCD1A6NED2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RCCD1A6NED2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RCCD1A6NED2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 AL118508.1-201ENST00000613502 2345 ntBASIC19.03■□□□□ 0.64
RCCD1A6NED2 CYP2D8P-201ENST00000433633 1490 ntBASIC19.03■□□□□ 0.64
RCCD1A6NED2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 AC022898.2-201ENST00000616822 1312 ntBASIC19.03■□□□□ 0.64
RCCD1A6NED2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 KRT8P9-201ENST00000558927 1449 ntBASIC19.03■□□□□ 0.64
RCCD1A6NED2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 MIR3917-201ENST00000580971 93 ntBASIC19.03■□□□□ 0.64
RCCD1A6NED2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
RCCD1A6NED2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RCCD1A6NED2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.02■□□□□ 0.64
RCCD1A6NED2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.02■□□□□ 0.64
RCCD1A6NED2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RCCD1A6NED2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RCCD1A6NED2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RCCD1A6NED2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.02■□□□□ 0.63
RCCD1A6NED2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RCCD1A6NED2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RCCD1A6NED2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.01■□□□□ 0.63
RCCD1A6NED2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RCCD1A6NED2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms