Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.24□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC024909.3-201ENST00000611513 2257 ntBASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC138907.5-202ENST00000569484 235 ntBASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 GRAMD4P7-201ENST00000578182 1232 ntBASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 PHGDH-210ENST00000641115 1638 ntBASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
IGKV3D-7A0A0C4DH55 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms