Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAV19A0A0A6YYK7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 RPS2P1-201ENST00000434010 821 ntBASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 SLC25A1P1-201ENST00000528351 927 ntBASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAV19A0A0A6YYK7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 PMS2P1-201ENST00000431037 1228 ntBASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 OR7E14P-202ENST00000530490 1290 ntBASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 NKAPP1-205ENST00000585790 367 ntBASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV19A0A0A6YYK7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 AC093677.2-201ENST00000600169 1863 ntBASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 AC116407.3-201ENST00000623905 1129 ntBASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV19A0A0A6YYK7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 HLA-J-201ENST00000462773 1622 ntBASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRAV19A0A0A6YYK7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms