Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC007663.1-201ENST00000438948 1240 ntBASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 FITM1-202ENST00000559294 800 ntBASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-7A0A0A0MS04 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC010240.3-201ENST00000607688 395 ntBASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC010653.2-201ENST00000623505 997 ntBASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRBV6-7A0A0A0MS04 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.99□□□□□ -0.01
TRBV6-7A0A0A0MS04 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms