Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB1Q9Y5F3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 AC008764.6-201ENST00000595909 2069 ntBASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 DRAXINP1-201ENST00000437611 948 ntBASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 TOB2P1-201ENST00000469761 992 ntBASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 AC023511.2-201ENST00000618803 211 ntBASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB1Q9Y5F3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 AL160237.2-201ENST00000556165 472 ntBASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 AL121772.3-201ENST00000610840 674 ntBASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB1Q9Y5F3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 GPALPP1-207ENST00000611650 899 ntBASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 AP000997.3-201ENST00000623333 2250 ntBASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB1Q9Y5F3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms