Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 RN7SL606P-201ENST00000472779 293 ntBASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 AC011840.4-201ENST00000578471 627 ntBASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 KRT89P-201ENST00000620027 1478 ntBASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 BICD1-207ENST00000551848 1962 ntBASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 AC009078.2-202ENST00000463353 338 ntBASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 AL390961.4-201ENST00000623958 2535 ntBASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.55■□□□□ 0.24
NPIPA1Q9UND3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 IGHV3-47-201ENST00000425060 335 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 AC079781.3-201ENST00000449110 356 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 MINOS1P3-201ENST00000457048 203 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 AL160237.2-201ENST00000556165 472 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 AC004263.2-201ENST00000617183 678 ntBASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA1Q9UND3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms